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Title: Multi‐species individual tree segmentation and identification based on improved Mask R‐CNN and UAV imagery in mixed forests
Authors: Zhang, C
Zhou, J
Wang, H
Tan, T
Cui, M
Huang, Z 
Wang, P
Zhang, L
Issue Date: Feb-2022
Source: Remote sensing, Feb. 2022, v. 14, no. 4, 874
Abstract: High‐resolution UAV imagery paired with a convolutional neural network approach of-fers significant advantages in accurately measuring forestry ecosystems. Despite numerous studies existing for individual tree crown delineation, species classification, and quantity detection, the comprehensive situation in performing the above tasks simultaneously has rarely been explored, especially in mixed forests. In this study, we propose a new method for individual tree segmentation and identification based on the improved Mask R‐CNN. For the optimized network, the fusion type in the feature pyramid network is modified from down‐top to top‐down to shorten the feature ac-quisition path among the different levels. Meanwhile, a boundary‐weighted loss module is intro-duced to the cross‐entropy loss function Lmask to refine the target loss. All geometric parameters (contour, the center of gravity and area) associated with canopies ultimately are extracted from the mask by a boundary segmentation algorithm. The results showed that F1‐score and mAP for coniferous species were higher than 90%, and that of broadleaf species were located between 75%– 85.44%. The producer’s accuracy of coniferous forests was distributed between 0.8–0.95 and that of broadleaf ranged in 0.87–0.93; user’s accuracy of coniferous was distributed between 0.81–0.84 and that of broadleaf ranged in 0.71–0.76. The total number of trees predicted was 50,041 for the entire study area, with an overall error of 5.11%. The method under study is compared with other networks including U‐net and YOLOv3. Results in this study show that the improved Mask R‐CNN has more advantages in broadleaf canopy segmentation and number detection.
Keywords: Mask R‐CNN
Tree crown segmentation
Tree quantity detection
Tree species identification
UAV images
Publisher: Molecular Diversity Preservation International (MDPI)
Journal: Remote sensing 
EISSN: 2072-4292
DOI: 10.3390/rs14040874
Rights: © 2022 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
The following publication Zhang, C., Zhou, J., Wang, H., Tan, T., Cui, M., Huang, Z., ... & Zhang, L. (2022). Multi-Species Individual Tree Segmentation and Identification Based on Improved Mask R-CNN and UAV Imagery in Mixed Forests. Remote Sensing, 14(4), 874 is available at https://doi.org/10.3390/rs14040874.
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