Please use this identifier to cite or link to this item: http://hdl.handle.net/10397/67644
DC FieldValueLanguage
dc.contributorDepartment of Electronic and Information Engineering-
dc.creatorCheng, KO-
dc.creatorLaw, NF-
dc.creatorSiu, WC-
dc.date.accessioned2017-07-27T08:33:53Z-
dc.date.available2017-07-27T08:33:53Z-
dc.identifier.isbn978-9-8814-7680-7 (electronic)-
dc.identifier.isbn978-1-4673-9593-9 (print on demand(PoD))-
dc.identifier.urihttp://hdl.handle.net/10397/67644-
dc.language.isoenen_US
dc.publisherInstitute of Electrical and Electronics Engineersen_US
dc.subjectBiological cellsen_US
dc.subjectDNAen_US
dc.subjectEncodingen_US
dc.subjectSociologyen_US
dc.subjectStatisticsen_US
dc.subjectDecodingen_US
dc.subjectCompression algorithmsen_US
dc.titleA novel DNA sequence compression scheme using both intra and inter sequences correlationen_US
dc.typeConference Paperen_US
dc.identifier.spage237-
dc.identifier.epage241-
dc.identifier.doi10.1109/APSIPA.2015.7415512-
dcterms.abstractClassical DNA sequence compression algorithms consider only intra-sequence similarity, i.e., similar subsequences within the DNA sequence are found and encoded together. In this work, in addition to the intra-sequence similarity, we exploit the inter-sequence similarities in that similar subsequences are found within the DNA sequence as well as from other reference sequences. Hence, highly similar sequences from the same population or partially similar chromosome sequences of the same species can be compressed together to reduce the storage space. Experimental results show that the proposed scheme achieves good compressibility for both partially similar chromosome sequences and highly similar population sequences.-
dcterms.bibliographicCitation2015 Asia-Pacific Signal and Information Processing Association Annual Summit and Conference (APSIPA), Hong Kong, China, 16-19 Dec 2015, p.237-241-
dcterms.issued2015-
dc.relation.conferenceAsia-Pacific Signal and Information Processing Association (APSIPA). Summit and Conference-
dc.identifier.rosgroupid2015003433-
dc.description.ros2015-2016 > Academic research: refereed > Refereed conference paper-
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